Cytosim  PI
Cytoskeleton Simulator
Filename extensions

Cytosim understands these file extensions:

Extension Type Typical usage
*.cym input configuration file
*.cms input configuration file for play containing display parameters
*.cmo output files generated by sim

sim usually produces 3 output files:

File Type Content
properties.cmo text properties of the objects
objects.cmo binary positions of the objects at different time points
messages.cmo text information such as the execution time

objects.cmo is called the trajectory file.


play reads:

  • properties.cmo
  • objects.cmo

'play live' reads the configuration file (by default config.cym) and usually does not write any file, but the user can save images or export simulation snapshot (a trajectory file containing only one time point). See menu -> export.