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Cytosim
PI
Cytoskeleton Simulator
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Cytosim understands these file extensions:
| Extension | Type | Typical usage |
|---|---|---|
*.cym | input | configuration file |
*.cms | input | configuration file for play containing display parameters |
*.cmo | output | files generated by sim |
sim usually produces 3 output files:
| File | Type | Content |
|---|---|---|
properties.cmo | text | properties of the objects |
objects.cmo | binary | positions of the objects at different time points |
messages.cmo | text | information such as the execution time |
objects.cmo is called the trajectory file.
play reads:
properties.cmo objects.cmo 'play live' reads the configuration file (by default config.cym) and usually does not write any file, but the user can save images or export simulation snapshot (a trajectory file containing only one time point). See menu -> export.